● Kai Cheng Group

Publications

  • Metaproteomics reveals age-specific alterations of gut microbiome in hamsters with SARS-CoV-2 infection

    Gut Microbes · 2025

    Journal

  • The microbiologist's guide to metaproteomics

    iMeta · 2025

    Journal

  • A complementary metaproteomic approach to interrogate microbiome cultivated from clinical colon biopsies

    Proteomics · 2024

    Journal

  • Assessing fecal metaproteomics workflow and small protein recovery using DDA and DIA PASEF mass spectrometry

    Microbiome Research Reports · 2024

    Journal

  • MetaPep: A core peptide database for faster human gut metaproteomics database searches

    Computational and Structural Biotechnology Journal · 2023

    Journal

  • Assessing the Dark Field of Metaproteome

    Analytical Chemistry · 2022

    Journal

  • iMetaLab Suite: A one-stop toolset for metaproteomics

    iMeta · 2022

    Journal

  • MetaLab-MAG: A Metaproteomic Data Analysis Platform for Genome-Level Characterization of Microbiomes from the Metagenome-Assembled Genomes Database

    Journal of Proteome Research · 2022

    Journal

  • Elevated colonic microbiota-associated paucimannosidic and truncated N-glycans in pediatric ulcerative colitis

    Journal of Proteomics · 2021

    Journal

  • Exploring the Microbiome-Wide Lysine Acetylation, Succinylation, and Propionylation in Human Gut Microbiota

    Analytical Chemistry · 2021

    Journal

  • A simultaneous identification and quantification strategy for determination of sulfhydryl-containing metabolites in normal- and high-fat diet hamsters using stable isotope labeling combined with LC-MS

    Analytica Chimica Acta · 2021

    Journal

  • Differential Lysis Approach Enables Selective Extraction of Taxon-Specific Proteins for Gut Metaproteomics

    Analytical Chemistry · 2020

    Journal

  • RapidAIM: a culture- and metaproteomics-based Rapid Assay of Individual Microbiome responses to drugs

    Microbiome · 2020

    Journal

  • Metaproteomics Reveals Growth Phase-Dependent Responses of an In Vitro Gut Microbiota to Metformin

    Journal of the American Society for Mass Spectrometry · 2020

    Journal

  • MetaLab 2.0 Enables Accurate Post-Translational Modifications Profiling in Metaproteomics

    Journal of the American Society for Mass Spectrometry · 2020

    Journal

  • MetaLab: an automated pipeline for metaproteomic data analysis

    Microbiome · 2017

    Journal